Cluster: CGMR055861_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055861
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_53600 | k141_53600_3 | 2346 | 5063 | - | CE1 |
| pfam | k141_53600 | k141_53600_4 | 5148 | 6515 | - | GIDA | FAD_oxidored |
| pfam | k141_53600 | k141_53600_5 | 6722 | 8599 | + | HlyD_3 | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 | HlyD_D23 |
| TC | k141_53600 | k141_53600_6 | 8639 | 9358 | + | 3.A.1.122.2 |
| TC | k141_53600 | k141_53600_7 | 9355 | 10530 | + | 3.A.1.122.2 |
| pfam | k141_53600 | k141_53600_8 | 10555 | 12816 | + | SLH | SLH |
| TC | k141_53600 | k141_53600_9 | 14658 | 15851 | + | 2.A.39.1.3 |
Gene ID: k141_53600_3
Type: CAZyme
Location: 2346 - 5063 (-)
Type: CAZyme
Location: 2346 - 5063 (-)
Gene ID: k141_53600_4
Type: pfam
Location: 5148 - 6515 (-)
Type: pfam
Location: 5148 - 6515 (-)
Gene ID: k141_53600_5
Type: pfam
Location: 6722 - 8599 (+)
Type: pfam
Location: 6722 - 8599 (+)
Gene ID: k141_53600_6
Type: TC
Location: 8639 - 9358 (+)
Type: TC
Location: 8639 - 9358 (+)
Gene ID: k141_53600_7
Type: TC
Location: 9355 - 10530 (+)
Type: TC
Location: 9355 - 10530 (+)
Gene ID: k141_53600_8
Type: pfam
Location: 10555 - 12816 (+)
Type: pfam
Location: 10555 - 12816 (+)
Gene ID: k141_53600_9
Type: TC
Location: 14658 - 15851 (+)
Type: TC
Location: 14658 - 15851 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.