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Cluster: CGMR055856_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_51828 k141_51828_117 122361 122666 - 4.A.3.2.6
TC k141_51828 k141_51828_118 122681 123985 - 4.A.3.2.6
CAZyme k141_51828 k141_51828_119 123996 125387 - GH1
TC k141_51828 k141_51828_120 125384 125710 - 4.A.3.2.8
TF k141_51828 k141_51828_121 125857 127722 + HTH_11 | Mga
TC k141_51828 k141_51828_122 127765 128565 - 4.A.6.1.5
TC k141_51828 k141_51828_123 128552 129364 - 4.A.6.1.5
TC k141_51828 k141_51828_124 129382 129855 - 4.A.6.1.5
TC k141_51828 k141_51828_125 129939 132668 - 3.A.23.1.1
pfam k141_51828 k141_51828_126 132767 134017 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_51828 k141_51828_127 134014 134520 - 4.A.6.1.5
Gene ID: k141_51828_117
Type: TC
Location: 122361 - 122666 (-)
Gene ID: k141_51828_118
Type: TC
Location: 122681 - 123985 (-)
Gene ID: k141_51828_119
Type: CAZyme
Location: 123996 - 125387 (-)
Gene ID: k141_51828_120
Type: TC
Location: 125384 - 125710 (-)
Gene ID: k141_51828_121
Type: TF
Location: 125857 - 127722 (+)
Gene ID: k141_51828_122
Type: TC
Location: 127765 - 128565 (-)
Gene ID: k141_51828_123
Type: TC
Location: 128552 - 129364 (-)
Gene ID: k141_51828_124
Type: TC
Location: 129382 - 129855 (-)
Gene ID: k141_51828_125
Type: TC
Location: 129939 - 132668 (-)
Gene ID: k141_51828_126
Type: pfam
Location: 132767 - 134017 (+)
Gene ID: k141_51828_127
Type: TC
Location: 134014 - 134520 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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