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Cluster: CGMR055856_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4162 k141_4162_24 18703 19869 + 2.A.4.7.2
NULL(UNKNOWN) k141_4162 k141_4162_25 19917 20438 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_4162 k141_4162_26 20585 21439 + LicD
TC k141_4162 k141_4162_27 21414 22931 + 2.A.66.1.40
CAZyme k141_4162 k141_4162_28 22928 23887 + GT2
pfam k141_4162 k141_4162_29 23880 25376 + O-antigen_lig
CAZyme k141_4162 k141_4162_30 25378 26535 + GT4
CAZyme k141_4162 k141_4162_31 26532 27485 + GT2
CAZyme k141_4162 k141_4162_32 27494 28465 + GT2
Gene ID: k141_4162_24
Type: TC
Location: 18703 - 19869 (+)
Gene ID: k141_4162_25
Type:
Location: 19917 - 20438 (-)
Gene ID: k141_4162_26
Type: pfam
Location: 20585 - 21439 (+)
Gene ID: k141_4162_27
Type: TC
Location: 21414 - 22931 (+)
Gene ID: k141_4162_28
Type: CAZyme
Location: 22928 - 23887 (+)
Gene ID: k141_4162_29
Type: pfam
Location: 23880 - 25376 (+)
Gene ID: k141_4162_30
Type: CAZyme
Location: 25378 - 26535 (+)
Gene ID: k141_4162_31
Type: CAZyme
Location: 26532 - 27485 (+)
Gene ID: k141_4162_32
Type: CAZyme
Location: 27494 - 28465 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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