Cluster: CGMR055853_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR055853
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_175378 | k141_175378_3 | 1189 | 3267 | - | GH5_4 |
| CAZyme | k141_175378 | k141_175378_4 | 3381 | 7856 | - | GH5_4 |
| CAZyme | k141_175378 | k141_175378_5 | 8052 | 9392 | - | GH1 |
| pfam | k141_175378 | k141_175378_6 | 9407 | 10231 | - | Amidohydro_2 |
| pfam | k141_175378 | k141_175378_7 | 10228 | 10962 | - | Amidohydro_2 |
| CAZyme | k141_175378 | k141_175378_8 | 10990 | 13368 | - | GH148 |
| TC | k141_175378 | k141_175378_9 | 13409 | 14272 | - | 3.A.1.1.39 |
| TC | k141_175378 | k141_175378_10 | 14265 | 15170 | - | 3.A.1.1.34 |
| STP | k141_175378 | k141_175378_11 | 15243 | 16640 | - | SBP_bac_1 |
| TF | k141_175378 | k141_175378_12 | 17101 | 19248 | + | HTH_AraC |
| TC | k141_175378 | k141_175378_13 | 19245 | 19892 | + | 9.B.28.1.2 |
| TC | k141_175378 | k141_175378_14 | 20304 | 23333 | - | 3.A.17.1.1 |
Gene ID: k141_175378_3
Type: CAZyme
Location: 1189 - 3267 (-)
Type: CAZyme
Location: 1189 - 3267 (-)
Gene ID: k141_175378_4
Type: CAZyme
Location: 3381 - 7856 (-)
Type: CAZyme
Location: 3381 - 7856 (-)
Gene ID: k141_175378_5
Type: CAZyme
Location: 8052 - 9392 (-)
Type: CAZyme
Location: 8052 - 9392 (-)
Gene ID: k141_175378_6
Type: pfam
Location: 9407 - 10231 (-)
Type: pfam
Location: 9407 - 10231 (-)
Gene ID: k141_175378_7
Type: pfam
Location: 10228 - 10962 (-)
Type: pfam
Location: 10228 - 10962 (-)
Gene ID: k141_175378_8
Type: CAZyme
Location: 10990 - 13368 (-)
Type: CAZyme
Location: 10990 - 13368 (-)
Gene ID: k141_175378_9
Type: TC
Location: 13409 - 14272 (-)
Type: TC
Location: 13409 - 14272 (-)
Gene ID: k141_175378_10
Type: TC
Location: 14265 - 15170 (-)
Type: TC
Location: 14265 - 15170 (-)
Gene ID: k141_175378_11
Type: STP
Location: 15243 - 16640 (-)
Type: STP
Location: 15243 - 16640 (-)
Gene ID: k141_175378_12
Type: TF
Location: 17101 - 19248 (+)
Type: TF
Location: 17101 - 19248 (+)
Gene ID: k141_175378_13
Type: TC
Location: 19245 - 19892 (+)
Type: TC
Location: 19245 - 19892 (+)
Gene ID: k141_175378_14
Type: TC
Location: 20304 - 23333 (-)
Type: TC
Location: 20304 - 23333 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.