Cluster: CGMR055846_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055846
- CGC Family ID: CGCFAM_00188
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10857 | k141_10857_4 | 3973 | 6528 | + | 3.A.5.1.1 |
| pfam | k141_10857 | k141_10857_5 | 6528 | 7856 | + | FtsX |
| pfam | k141_10857 | k141_10857_6 | 7951 | 8196 | + | RRM_1 |
| CAZyme | k141_10857 | k141_10857_7 | 8248 | 9228 | - | GT2 |
Gene ID: k141_10857_4
Type: TC
Location: 3973 - 6528 (+)
Type: TC
Location: 3973 - 6528 (+)
Gene ID: k141_10857_5
Type: pfam
Location: 6528 - 7856 (+)
Type: pfam
Location: 6528 - 7856 (+)
Gene ID: k141_10857_6
Type: pfam
Location: 7951 - 8196 (+)
Type: pfam
Location: 7951 - 8196 (+)
Gene ID: k141_10857_7
Type: CAZyme
Location: 8248 - 9228 (-)
Type: CAZyme
Location: 8248 - 9228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_C
Species
Helicobacter_C magdeburgensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.