Cluster: CGMR055846_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055846
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_99018 | k141_99018_42 | 40654 | 41544 | - | CE11 |
| pfam | k141_99018 | k141_99018_43 | 41541 | 42131 | - | MinC_C |
| STP | k141_99018 | k141_99018_44 | 42145 | 43521 | - | Peptidase_M23 |
| TC | k141_99018 | k141_99018_45 | 43694 | 44827 | - | 3.A.6.2.1 |
Gene ID: k141_99018_42
Type: CAZyme
Location: 40654 - 41544 (-)
Type: CAZyme
Location: 40654 - 41544 (-)
Gene ID: k141_99018_43
Type: pfam
Location: 41541 - 42131 (-)
Type: pfam
Location: 41541 - 42131 (-)
Gene ID: k141_99018_44
Type: STP
Location: 42145 - 43521 (-)
Type: STP
Location: 42145 - 43521 (-)
Gene ID: k141_99018_45
Type: TC
Location: 43694 - 44827 (-)
Type: TC
Location: 43694 - 44827 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_C
Species
Helicobacter_C magdeburgensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.