Cluster: CGMR055846_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055846
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_83941 | k141_83941_19 | 16267 | 17676 | + | 2.A.22.5.3 |
| peptidase | k141_83941 | k141_83941_20 | 17665 | 18813 | - | C26.UPW |
| pfam | k141_83941 | k141_83941_21 | 18810 | 19361 | - | DUF507 |
| CAZyme | k141_83941 | k141_83941_22 | 19425 | 21437 | - | GT51 |
| TC | k141_83941 | k141_83941_23 | 21471 | 22853 | - | 1.B.52.2.1 |
Gene ID: k141_83941_19
Type: TC
Location: 16267 - 17676 (+)
Type: TC
Location: 16267 - 17676 (+)
Gene ID: k141_83941_20
Type: peptidase
Location: 17665 - 18813 (-)
Type: peptidase
Location: 17665 - 18813 (-)
Gene ID: k141_83941_21
Type: pfam
Location: 18810 - 19361 (-)
Type: pfam
Location: 18810 - 19361 (-)
Gene ID: k141_83941_22
Type: CAZyme
Location: 19425 - 21437 (-)
Type: CAZyme
Location: 19425 - 21437 (-)
Gene ID: k141_83941_23
Type: TC
Location: 21471 - 22853 (-)
Type: TC
Location: 21471 - 22853 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_C
Species
Helicobacter_C magdeburgensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.