Cluster: CGMR055594_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR055594
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1246237 | k141_1246237_217 | 262445 | 264700 | + | 3.A.1.26.7 |
| peptidase | k141_1246237 | k141_1246237_218 | 264819 | 265745 | + | C40.UPW |
| pfam | k141_1246237 | k141_1246237_219 | 265814 | 267523 | + | AICARFT_IMPCHas | AICARFT_IMPCHas | MGS |
| TC | k141_1246237 | k141_1246237_220 | 267534 | 268604 | + | 9.B.146.1.3 |
| pfam | k141_1246237 | k141_1246237_221 | 268678 | 270015 | + | SH3_3 |
| TC | k141_1246237 | k141_1246237_222 | 270018 | 272033 | + | 3.A.1.121.4 |
| pfam | k141_1246237 | k141_1246237_223 | 272467 | 273360 | + | PDDEXK_2 |
| CAZyme | k141_1246237 | k141_1246237_224 | 273494 | 274150 | - | GT4 |
| pfam | k141_1246237 | k141_1246237_225 | 274128 | 274595 | - | Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_4_4 |
| CAZyme | k141_1246237 | k141_1246237_226 | 274592 | 275350 | - | GT2 |
| pfam | k141_1246237 | k141_1246237_227 | 275354 | 276355 | - | Stealth_CR2 | Stealth_CR1 | Stealth_CR3 |
| pfam | k141_1246237 | k141_1246237_228 | 276365 | 277441 | - | EpsG |
| CAZyme | k141_1246237 | k141_1246237_229 | 277438 | 278403 | - | GT2 |
Gene ID: k141_1246237_217
Type: TC
Location: 262445 - 264700 (+)
Type: TC
Location: 262445 - 264700 (+)
Gene ID: k141_1246237_218
Type: peptidase
Location: 264819 - 265745 (+)
Type: peptidase
Location: 264819 - 265745 (+)
Gene ID: k141_1246237_219
Type: pfam
Location: 265814 - 267523 (+)
Type: pfam
Location: 265814 - 267523 (+)
Gene ID: k141_1246237_220
Type: TC
Location: 267534 - 268604 (+)
Type: TC
Location: 267534 - 268604 (+)
Gene ID: k141_1246237_221
Type: pfam
Location: 268678 - 270015 (+)
Type: pfam
Location: 268678 - 270015 (+)
Gene ID: k141_1246237_222
Type: TC
Location: 270018 - 272033 (+)
Type: TC
Location: 270018 - 272033 (+)
Gene ID: k141_1246237_223
Type: pfam
Location: 272467 - 273360 (+)
Type: pfam
Location: 272467 - 273360 (+)
Gene ID: k141_1246237_224
Type: CAZyme
Location: 273494 - 274150 (-)
Type: CAZyme
Location: 273494 - 274150 (-)
Gene ID: k141_1246237_225
Type: pfam
Location: 274128 - 274595 (-)
Type: pfam
Location: 274128 - 274595 (-)
Gene ID: k141_1246237_226
Type: CAZyme
Location: 274592 - 275350 (-)
Type: CAZyme
Location: 274592 - 275350 (-)
Gene ID: k141_1246237_227
Type: pfam
Location: 275354 - 276355 (-)
Type: pfam
Location: 275354 - 276355 (-)
Gene ID: k141_1246237_228
Type: pfam
Location: 276365 - 277441 (-)
Type: pfam
Location: 276365 - 277441 (-)
Gene ID: k141_1246237_229
Type: CAZyme
Location: 277438 - 278403 (-)
Type: CAZyme
Location: 277438 - 278403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_F
Species
Treponema_F sp017629095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.