Cluster: CGMR055594_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR055594
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1246237 | k141_1246237_60 | 69196 | 70998 | + | GH3 |
| pfam | k141_1246237 | k141_1246237_61 | 70995 | 71924 | + | Acetyltransf_1 | FR47 |
| TC | k141_1246237 | k141_1246237_62 | 72036 | 73550 | + | 2.A.21.2.3 |
| CAZyme | k141_1246237 | k141_1246237_63 | 73705 | 76149 | - | GT35 |
| CAZyme | k141_1246237 | k141_1246237_64 | 76266 | 78416 | - | GH13_11 |
| TC | k141_1246237 | k141_1246237_65 | 78601 | 78924 | - | 2.A.78.1.1 |
| TC | k141_1246237 | k141_1246237_66 | 78926 | 79618 | - | 2.A.78.1.1 |
Gene ID: k141_1246237_60
Type: CAZyme
Location: 69196 - 70998 (+)
Type: CAZyme
Location: 69196 - 70998 (+)
Gene ID: k141_1246237_61
Type: pfam
Location: 70995 - 71924 (+)
Type: pfam
Location: 70995 - 71924 (+)
Gene ID: k141_1246237_62
Type: TC
Location: 72036 - 73550 (+)
Type: TC
Location: 72036 - 73550 (+)
Gene ID: k141_1246237_63
Type: CAZyme
Location: 73705 - 76149 (-)
Type: CAZyme
Location: 73705 - 76149 (-)
Gene ID: k141_1246237_64
Type: CAZyme
Location: 76266 - 78416 (-)
Type: CAZyme
Location: 76266 - 78416 (-)
Gene ID: k141_1246237_65
Type: TC
Location: 78601 - 78924 (-)
Type: TC
Location: 78601 - 78924 (-)
Gene ID: k141_1246237_66
Type: TC
Location: 78926 - 79618 (-)
Type: TC
Location: 78926 - 79618 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_F
Species
Treponema_F sp017629095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.