Cluster: CGMR055594_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055594
- CGC Family ID: CGCFAM_00677
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1246237 | k141_1246237_25 | 28856 | 29764 | + | 3.A.1.1.18 |
| TC | k141_1246237 | k141_1246237_26 | 29777 | 30664 | + | 3.A.1.1.34 |
| CAZyme | k141_1246237 | k141_1246237_27 | 30748 | 32952 | + | GH112 |
Gene ID: k141_1246237_25
Type: TC
Location: 28856 - 29764 (+)
Type: TC
Location: 28856 - 29764 (+)
Gene ID: k141_1246237_26
Type: TC
Location: 29777 - 30664 (+)
Type: TC
Location: 29777 - 30664 (+)
Gene ID: k141_1246237_27
Type: CAZyme
Location: 30748 - 32952 (+)
Type: CAZyme
Location: 30748 - 32952 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_F
Species
Treponema_F sp017629095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.