Cluster: CGMR055594_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR055594
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1003140 | k141_1003140_127 | 138853 | 140436 | + | GH179 |
| TC | k141_1003140 | k141_1003140_128 | 140610 | 141449 | - | 3.A.1.3.27 |
| CAZyme | k141_1003140 | k141_1003140_129 | 141636 | 143861 | - | AA2 | AA2 |
Gene ID: k141_1003140_127
Type: CAZyme
Location: 138853 - 140436 (+)
Type: CAZyme
Location: 138853 - 140436 (+)
Gene ID: k141_1003140_128
Type: TC
Location: 140610 - 141449 (-)
Type: TC
Location: 140610 - 141449 (-)
Gene ID: k141_1003140_129
Type: CAZyme
Location: 141636 - 143861 (-)
Type: CAZyme
Location: 141636 - 143861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_F
Species
Treponema_F sp017629095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.