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Cluster: CGMR055594_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_739716 k141_739716_3 1315 2700 + 3.A.6.3.1
pfam k141_739716 k141_739716_4 2711 3148 + FliJ
pfam k141_739716 k141_739716_5 3251 4903 - PRK
TC k141_739716 k141_739716_6 4970 6526 - 9.B.34.1.3
CAZyme k141_739716 k141_739716_7 6591 7985 + GT4
pfam k141_739716 k141_739716_8 7986 9188 - ThiI | THUMP | ThiI_fer
TC k141_739716 k141_739716_9 9278 11239 + 4.C.1.1.14
NULL(UNKNOWN) k141_739716 k141_739716_10 11284 12465 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_739716 k141_739716_11 12437 12835 - VanZ
TC k141_739716 k141_739716_12 12816 13907 - 9.B.146.1.4
TF k141_739716 k141_739716_13 14074 14448 + Fe_dep_repress
pfam k141_739716 k141_739716_14 14455 15873 + Lyase_1 | ASL_C2
TC k141_739716 k141_739716_15 16018 17400 + 3.D.4.3.2
TC k141_739716 k141_739716_16 17391 18401 + 3.D.4.3.2
TC k141_739716 k141_739716_17 18599 20335 + 3.A.1.129.1
TC k141_739716 k141_739716_18 20332 22017 + 3.A.1.112.9
TC k141_739716 k141_739716_19 22094 22906 + 3.A.1.3.10
TC k141_739716 k141_739716_20 22925 23560 + 3.A.1.3.12
TC k141_739716 k141_739716_21 23571 24323 + 3.A.1.3.24
Gene ID: k141_739716_3
Type: TC
Location: 1315 - 2700 (+)
Gene ID: k141_739716_4
Type: pfam
Location: 2711 - 3148 (+)
Gene ID: k141_739716_5
Type: pfam
Location: 3251 - 4903 (-)
Gene ID: k141_739716_6
Type: TC
Location: 4970 - 6526 (-)
Gene ID: k141_739716_7
Type: CAZyme
Location: 6591 - 7985 (+)
Gene ID: k141_739716_8
Type: pfam
Location: 7986 - 9188 (-)
Gene ID: k141_739716_9
Type: TC
Location: 9278 - 11239 (+)
Gene ID: k141_739716_10
Type:
Location: 11284 - 12465 (+)
Gene ID: k141_739716_11
Type: pfam
Location: 12437 - 12835 (-)
Gene ID: k141_739716_12
Type: TC
Location: 12816 - 13907 (-)
Gene ID: k141_739716_13
Type: TF
Location: 14074 - 14448 (+)
Gene ID: k141_739716_14
Type: pfam
Location: 14455 - 15873 (+)
Gene ID: k141_739716_15
Type: TC
Location: 16018 - 17400 (+)
Gene ID: k141_739716_16
Type: TC
Location: 17391 - 18401 (+)
Gene ID: k141_739716_17
Type: TC
Location: 18599 - 20335 (+)
Gene ID: k141_739716_18
Type: TC
Location: 20332 - 22017 (+)
Gene ID: k141_739716_19
Type: TC
Location: 22094 - 22906 (+)
Gene ID: k141_739716_20
Type: TC
Location: 22925 - 23560 (+)
Gene ID: k141_739716_21
Type: TC
Location: 23571 - 24323 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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