Cluster: CGMR055594_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055594
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_844549 | k141_844549_30 | 34153 | 36816 | + | GT51 |
| pfam | k141_844549 | k141_844549_31 | 36857 | 37246 | + | ParBc |
| pfam | k141_844549 | k141_844549_32 | 37251 | 37436 | - | FeoB_associated |
| TC | k141_844549 | k141_844549_33 | 37521 | 40736 | - | 1.B.42.2.1 |
| pfam | k141_844549 | k141_844549_34 | 40782 | 43658 | - | UvrA_DNA-bind | UvrA_inter |
| STP | k141_844549 | k141_844549_35 | 43898 | 45313 | + | PALP |
| TC | k141_844549 | k141_844549_36 | 45316 | 45813 | - | 3.A.11.1.4 |
Gene ID: k141_844549_30
Type: CAZyme
Location: 34153 - 36816 (+)
Type: CAZyme
Location: 34153 - 36816 (+)
Gene ID: k141_844549_31
Type: pfam
Location: 36857 - 37246 (+)
Type: pfam
Location: 36857 - 37246 (+)
Gene ID: k141_844549_32
Type: pfam
Location: 37251 - 37436 (-)
Type: pfam
Location: 37251 - 37436 (-)
Gene ID: k141_844549_33
Type: TC
Location: 37521 - 40736 (-)
Type: TC
Location: 37521 - 40736 (-)
Gene ID: k141_844549_34
Type: pfam
Location: 40782 - 43658 (-)
Type: pfam
Location: 40782 - 43658 (-)
Gene ID: k141_844549_35
Type: STP
Location: 43898 - 45313 (+)
Type: STP
Location: 43898 - 45313 (+)
Gene ID: k141_844549_36
Type: TC
Location: 45316 - 45813 (-)
Type: TC
Location: 45316 - 45813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_F
Species
Treponema_F sp017629095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.