Cluster: CGMR055558_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055558
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_154302 | k141_154302_5 | 7088 | 8080 | + | 3.A.1.24.4 |
| TC | k141_154302 | k141_154302_6 | 8077 | 8784 | + | 3.A.1.24.5 |
| TC | k141_154302 | k141_154302_7 | 8883 | 9737 | + | 3.A.1.24.5 |
| CAZyme | k141_154302 | k141_154302_8 | 9887 | 10366 | - | GH4 |
Gene ID: k141_154302_5
Type: TC
Location: 7088 - 8080 (+)
Type: TC
Location: 7088 - 8080 (+)
Gene ID: k141_154302_6
Type: TC
Location: 8077 - 8784 (+)
Type: TC
Location: 8077 - 8784 (+)
Gene ID: k141_154302_7
Type: TC
Location: 8883 - 9737 (+)
Type: TC
Location: 8883 - 9737 (+)
Gene ID: k141_154302_8
Type: CAZyme
Location: 9887 - 10366 (-)
Type: CAZyme
Location: 9887 - 10366 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Scrofimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.