Cluster: CGMR055558_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR055558
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_413594 | k141_413594_11 | 8438 | 9910 | - | GH20 |
| peptidase | k141_413594 | k141_413594_12 | 10148 | 11428 | + | M20.UPD |
| pfam | k141_413594 | k141_413594_13 | 11452 | 12288 | - | N6_N4_Mtase |
| TC | k141_413594 | k141_413594_14 | 12701 | 13684 | + | 3.A.1.5.26 |
| TC | k141_413594 | k141_413594_15 | 13694 | 14887 | + | 3.A.1.5.26 |
| TC | k141_413594 | k141_413594_16 | 14884 | 17127 | + | 3.A.1.5.26 |
Gene ID: k141_413594_11
Type: CAZyme
Location: 8438 - 9910 (-)
Type: CAZyme
Location: 8438 - 9910 (-)
Gene ID: k141_413594_12
Type: peptidase
Location: 10148 - 11428 (+)
Type: peptidase
Location: 10148 - 11428 (+)
Gene ID: k141_413594_13
Type: pfam
Location: 11452 - 12288 (-)
Type: pfam
Location: 11452 - 12288 (-)
Gene ID: k141_413594_14
Type: TC
Location: 12701 - 13684 (+)
Type: TC
Location: 12701 - 13684 (+)
Gene ID: k141_413594_15
Type: TC
Location: 13694 - 14887 (+)
Type: TC
Location: 13694 - 14887 (+)
Gene ID: k141_413594_16
Type: TC
Location: 14884 - 17127 (+)
Type: TC
Location: 14884 - 17127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Scrofimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.