Cluster: CGMR055558_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR055558
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_174266 | k141_174266_18 | 17643 | 18812 | + | 2.A.37.5.2 |
| NULL(UNKNOWN) | k141_174266 | k141_174266_19 | 18809 | 18961 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_174266 | k141_174266_20 | 19067 | 20125 | - | GramPos_pilinD1 | GramPos_pilinBB |
| CAZyme | k141_174266 | k141_174266_21 | 20593 | 23343 | - | GH3 |
| CAZyme | k141_174266 | k141_174266_22 | 23322 | 25733 | - | GH3 |
Gene ID: k141_174266_18
Type: TC
Location: 17643 - 18812 (+)
Type: TC
Location: 17643 - 18812 (+)
Gene ID: k141_174266_19
Type:
Location: 18809 - 18961 (-)
Type:
Location: 18809 - 18961 (-)
Gene ID: k141_174266_20
Type: pfam
Location: 19067 - 20125 (-)
Type: pfam
Location: 19067 - 20125 (-)
Gene ID: k141_174266_21
Type: CAZyme
Location: 20593 - 23343 (-)
Type: CAZyme
Location: 20593 - 23343 (-)
Gene ID: k141_174266_22
Type: CAZyme
Location: 23322 - 25733 (-)
Type: CAZyme
Location: 23322 - 25733 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Scrofimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.