Cluster: CGMR055558_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR055558
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_469334 | k141_469334_3 | 2398 | 3963 | + | 2.A.3.3.16 |
| NULL(UNKNOWN) | k141_469334 | k141_469334_4 | 4016 | 4399 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_469334 | k141_469334_5 | 4508 | 7642 | - | GH2 |
| pfam | k141_469334 | k141_469334_6 | 8002 | 8991 | + | LytR_cpsA_psr |
| CAZyme | k141_469334 | k141_469334_7 | 9090 | 11465 | + | GT4 | GT4 |
Gene ID: k141_469334_3
Type: TC
Location: 2398 - 3963 (+)
Type: TC
Location: 2398 - 3963 (+)
Gene ID: k141_469334_4
Type:
Location: 4016 - 4399 (-)
Type:
Location: 4016 - 4399 (-)
Gene ID: k141_469334_5
Type: CAZyme
Location: 4508 - 7642 (-)
Type: CAZyme
Location: 4508 - 7642 (-)
Gene ID: k141_469334_6
Type: pfam
Location: 8002 - 8991 (+)
Type: pfam
Location: 8002 - 8991 (+)
Gene ID: k141_469334_7
Type: CAZyme
Location: 9090 - 11465 (+)
Type: CAZyme
Location: 9090 - 11465 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Scrofimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.