Cluster: CGMR054953_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_119894 | k141_119894_72 | 75482 | 77143 | + | 4.C.1.1.6 |
| pfam | k141_119894 | k141_119894_73 | 77140 | 78333 | + | Acyl-CoA_dh_1 | Acyl-CoA_dh_M | Acyl-CoA_dh_N | Acyl-CoA_dh_2 |
| TC | k141_119894 | k141_119894_74 | 78330 | 79520 | + | 2.A.1.13.21 |
| CAZyme | k141_119894 | k141_119894_75 | 79525 | 80565 | + | GH88 |
Gene ID: k141_119894_72
Type: TC
Location: 75482 - 77143 (+)
Type: TC
Location: 75482 - 77143 (+)
Gene ID: k141_119894_73
Type: pfam
Location: 77140 - 78333 (+)
Type: pfam
Location: 77140 - 78333 (+)
Gene ID: k141_119894_74
Type: TC
Location: 78330 - 79520 (+)
Type: TC
Location: 78330 - 79520 (+)
Gene ID: k141_119894_75
Type: CAZyme
Location: 79525 - 80565 (+)
Type: CAZyme
Location: 79525 - 80565 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.