Cluster: CGMR054953_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_57003 | k141_57003_71 | 82931 | 84103 | + | 9.B.146.1.6 |
| pfam | k141_57003 | k141_57003_72 | 84100 | 85629 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_57003 | k141_57003_73 | 85626 | 86819 | + | 2.A.103.1.1 |
| CAZyme | k141_57003 | k141_57003_74 | 86816 | 87889 | + | GT28 |
Gene ID: k141_57003_71
Type: TC
Location: 82931 - 84103 (+)
Type: TC
Location: 82931 - 84103 (+)
Gene ID: k141_57003_72
Type: pfam
Location: 84100 - 85629 (+)
Type: pfam
Location: 84100 - 85629 (+)
Gene ID: k141_57003_73
Type: TC
Location: 85626 - 86819 (+)
Type: TC
Location: 85626 - 86819 (+)
Gene ID: k141_57003_74
Type: CAZyme
Location: 86816 - 87889 (+)
Type: CAZyme
Location: 86816 - 87889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.