Cluster: CGMR054953_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_211707 | k141_211707_19 | 21810 | 23171 | + | 2.A.1.82.4 |
| TF | k141_211707 | k141_211707_20 | 23569 | 24240 | + | GntR |
| pfam | k141_211707 | k141_211707_21 | 24237 | 25247 | - | FAD_binding_4 | MurB_C |
| CAZyme | k141_211707 | k141_211707_22 | 25917 | 27569 | - | AA3_2 |
Gene ID: k141_211707_19
Type: TC
Location: 21810 - 23171 (+)
Type: TC
Location: 21810 - 23171 (+)
Gene ID: k141_211707_20
Type: TF
Location: 23569 - 24240 (+)
Type: TF
Location: 23569 - 24240 (+)
Gene ID: k141_211707_21
Type: pfam
Location: 24237 - 25247 (-)
Type: pfam
Location: 24237 - 25247 (-)
Gene ID: k141_211707_22
Type: CAZyme
Location: 25917 - 27569 (-)
Type: CAZyme
Location: 25917 - 27569 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.