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Cluster: CGMR054953_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16926 k141_16926_55 58735 59841 + GT4
CAZyme k141_16926 k141_16926_56 59838 60680 + CE4
CAZyme k141_16926 k141_16926_57 60653 61459 + GT2
CAZyme k141_16926 k141_16926_58 61478 62209 + CE4
CAZyme k141_16926 k141_16926_59 62206 63384 + GT4
CAZyme k141_16926 k141_16926_60 63537 64679 + GT4
pfam k141_16926 k141_16926_61 64735 65007 - CxxCxxCC
pfam k141_16926 k141_16926_62 65004 65768 - DUF218
CAZyme k141_16926 k141_16926_63 65765 66670 - GT9
TC k141_16926 k141_16926_64 66827 68611 + 3.A.1.106.1
Gene ID: k141_16926_55
Type: CAZyme
Location: 58735 - 59841 (+)
Gene ID: k141_16926_56
Type: CAZyme
Location: 59838 - 60680 (+)
Gene ID: k141_16926_57
Type: CAZyme
Location: 60653 - 61459 (+)
Gene ID: k141_16926_58
Type: CAZyme
Location: 61478 - 62209 (+)
Gene ID: k141_16926_59
Type: CAZyme
Location: 62206 - 63384 (+)
Gene ID: k141_16926_60
Type: CAZyme
Location: 63537 - 64679 (+)
Gene ID: k141_16926_61
Type: pfam
Location: 64735 - 65007 (-)
Gene ID: k141_16926_62
Type: pfam
Location: 65004 - 65768 (-)
Gene ID: k141_16926_63
Type: CAZyme
Location: 65765 - 66670 (-)
Gene ID: k141_16926_64
Type: TC
Location: 66827 - 68611 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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