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Cluster: CGMR054953_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_28141 k141_28141_62 58522 59577 + GH3
pfam k141_28141 k141_28141_63 59525 61363 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH
TC k141_28141 k141_28141_64 61403 61975 + 4.F.1.1.8
TC k141_28141 k141_28141_65 61981 63231 + 2.A.1.56.1
pfam k141_28141 k141_28141_66 63406 64233 - QueF | QueF_N
pfam k141_28141 k141_28141_67 64542 65849 + ICL | ICL | PEP_mutase
TC k141_28141 k141_28141_68 66437 67405 + 3.A.3.27.4
pfam k141_28141 k141_28141_69 67407 67592 + FixS
TC k141_28141 k141_28141_70 67776 69263 + 3.D.4.3.3
TC k141_28141 k141_28141_71 69274 69933 + 3.D.4.3.3
NULL(UNKNOWN) k141_28141 k141_28141_72 69934 70107 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_28141 k141_28141_73 70104 71021 + 3.D.4.3.3
Gene ID: k141_28141_62
Type: CAZyme
Location: 58522 - 59577 (+)
Gene ID: k141_28141_63
Type: pfam
Location: 59525 - 61363 (+)
Gene ID: k141_28141_64
Type: TC
Location: 61403 - 61975 (+)
Gene ID: k141_28141_65
Type: TC
Location: 61981 - 63231 (+)
Gene ID: k141_28141_66
Type: pfam
Location: 63406 - 64233 (-)
Gene ID: k141_28141_67
Type: pfam
Location: 64542 - 65849 (+)
Gene ID: k141_28141_68
Type: TC
Location: 66437 - 67405 (+)
Gene ID: k141_28141_69
Type: pfam
Location: 67407 - 67592 (+)
Gene ID: k141_28141_70
Type: TC
Location: 67776 - 69263 (+)
Gene ID: k141_28141_71
Type: TC
Location: 69274 - 69933 (+)
Gene ID: k141_28141_72
Type:
Location: 69934 - 70107 (+)
Gene ID: k141_28141_73
Type: TC
Location: 70104 - 71021 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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