Cluster: CGMR054953_CGC13
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- CGC Family ID: CGCFAM_00432
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_114913 | k141_114913_88 | 98432 | 98935 | + | 3.A.6.2.1 |
| pfam | k141_114913 | k141_114913_89 | 98939 | 99241 | + | FliO |
| TC | k141_114913 | k141_114913_90 | 99228 | 100016 | + | 3.A.6.2.1 |
| TC | k141_114913 | k141_114913_91 | 100026 | 100295 | + | 3.A.6.2.1 |
| TC | k141_114913 | k141_114913_92 | 100391 | 101176 | + | 3.A.6.2.1 |
| pfam | k141_114913 | k141_114913_93 | 101173 | 101862 | - | RNase_T |
| STP | k141_114913 | k141_114913_94 | 101859 | 103769 | - | CBS | CBS | cNMP_binding |
| TC | k141_114913 | k141_114913_95 | 103890 | 105596 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | k141_114913 | k141_114913_96 | 105618 | 106055 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_114913 | k141_114913_97 | 106055 | 107479 | - | 1.B.52.2.1 |
| pfam | k141_114913 | k141_114913_98 | 107547 | 108764 | - | Flagellin_N |
| pfam | k141_114913 | k141_114913_99 | 108800 | 110515 | - | Flg_bbr_C | FlgK_D1 |
| CAZyme | k141_114913 | k141_114913_100 | 110621 | 111586 | - | GH73 |
Gene ID: k141_114913_88
Type: TC
Location: 98432 - 98935 (+)
Type: TC
Location: 98432 - 98935 (+)
Gene ID: k141_114913_89
Type: pfam
Location: 98939 - 99241 (+)
Type: pfam
Location: 98939 - 99241 (+)
Gene ID: k141_114913_90
Type: TC
Location: 99228 - 100016 (+)
Type: TC
Location: 99228 - 100016 (+)
Gene ID: k141_114913_91
Type: TC
Location: 100026 - 100295 (+)
Type: TC
Location: 100026 - 100295 (+)
Gene ID: k141_114913_92
Type: TC
Location: 100391 - 101176 (+)
Type: TC
Location: 100391 - 101176 (+)
Gene ID: k141_114913_93
Type: pfam
Location: 101173 - 101862 (-)
Type: pfam
Location: 101173 - 101862 (-)
Gene ID: k141_114913_94
Type: STP
Location: 101859 - 103769 (-)
Type: STP
Location: 101859 - 103769 (-)
Gene ID: k141_114913_95
Type: TC
Location: 103890 - 105596 (-)
Type: TC
Location: 103890 - 105596 (-)
Gene ID: k141_114913_96
Type:
Location: 105618 - 106055 (-)
Type:
Location: 105618 - 106055 (-)
Gene ID: k141_114913_97
Type: TC
Location: 106055 - 107479 (-)
Type: TC
Location: 106055 - 107479 (-)
Gene ID: k141_114913_98
Type: pfam
Location: 107547 - 108764 (-)
Type: pfam
Location: 107547 - 108764 (-)
Gene ID: k141_114913_99
Type: pfam
Location: 108800 - 110515 (-)
Type: pfam
Location: 108800 - 110515 (-)
Gene ID: k141_114913_100
Type: CAZyme
Location: 110621 - 111586 (-)
Type: CAZyme
Location: 110621 - 111586 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.