Cluster: CGMR054953_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_139911 | k141_139911_51 | 62499 | 63305 | + | GT2 |
| TC | k141_139911 | k141_139911_52 | 63316 | 64587 | - | 9.B.18.1.3 |
| pfam | k141_139911 | k141_139911_53 | 64648 | 65694 | - | Wzz |
| TC | k141_139911 | k141_139911_54 | 66267 | 68150 | + | 9.B.97.5.1 |
| pfam | k141_139911 | k141_139911_55 | 68308 | 69321 | + | NMT1 | NMT1_2 |
| pfam | k141_139911 | k141_139911_56 | 69321 | 70148 | + | BPD_transp_1 |
| TC | k141_139911 | k141_139911_57 | 70124 | 70867 | + | 3.A.1.16.1 |
Gene ID: k141_139911_51
Type: CAZyme
Location: 62499 - 63305 (+)
Type: CAZyme
Location: 62499 - 63305 (+)
Gene ID: k141_139911_52
Type: TC
Location: 63316 - 64587 (-)
Type: TC
Location: 63316 - 64587 (-)
Gene ID: k141_139911_53
Type: pfam
Location: 64648 - 65694 (-)
Type: pfam
Location: 64648 - 65694 (-)
Gene ID: k141_139911_54
Type: TC
Location: 66267 - 68150 (+)
Type: TC
Location: 66267 - 68150 (+)
Gene ID: k141_139911_55
Type: pfam
Location: 68308 - 69321 (+)
Type: pfam
Location: 68308 - 69321 (+)
Gene ID: k141_139911_56
Type: pfam
Location: 69321 - 70148 (+)
Type: pfam
Location: 69321 - 70148 (+)
Gene ID: k141_139911_57
Type: TC
Location: 70124 - 70867 (+)
Type: TC
Location: 70124 - 70867 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.