Cluster: CGMR054953_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- CGC Family ID: CGCFAM_05664
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_35728 | k141_35728_15 | 16522 | 17754 | - | 9.B.43.1.1 |
| TC | k141_35728 | k141_35728_16 | 17813 | 18166 | - | 9.B.35.2.1 |
| TF | k141_35728 | k141_35728_17 | 18372 | 19127 | + | GntR |
| CAZyme | k141_35728 | k141_35728_18 | 19139 | 20071 | + | CE4 |
Gene ID: k141_35728_15
Type: TC
Location: 16522 - 17754 (-)
Type: TC
Location: 16522 - 17754 (-)
Gene ID: k141_35728_16
Type: TC
Location: 17813 - 18166 (-)
Type: TC
Location: 17813 - 18166 (-)
Gene ID: k141_35728_17
Type: TF
Location: 18372 - 19127 (+)
Type: TF
Location: 18372 - 19127 (+)
Gene ID: k141_35728_18
Type: CAZyme
Location: 19139 - 20071 (+)
Type: CAZyme
Location: 19139 - 20071 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.