Cluster: CGMR054953_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_150569 | k141_150569_50 | 56154 | 56978 | - | CBM50 |
| pfam | k141_150569 | k141_150569_51 | 57002 | 57826 | - | PCMT |
| pfam | k141_150569 | k141_150569_52 | 57823 | 58563 | - | SurE |
| TC | k141_150569 | k141_150569_53 | 58680 | 59321 | + | 9.B.31.1.1 |
| pfam | k141_150569 | k141_150569_54 | 59325 | 60383 | - | TsaD |
| TC | k141_150569 | k141_150569_55 | 60572 | 61864 | + | 2.A.40.7.6 |
Gene ID: k141_150569_50
Type: CAZyme
Location: 56154 - 56978 (-)
Type: CAZyme
Location: 56154 - 56978 (-)
Gene ID: k141_150569_51
Type: pfam
Location: 57002 - 57826 (-)
Type: pfam
Location: 57002 - 57826 (-)
Gene ID: k141_150569_52
Type: pfam
Location: 57823 - 58563 (-)
Type: pfam
Location: 57823 - 58563 (-)
Gene ID: k141_150569_53
Type: TC
Location: 58680 - 59321 (+)
Type: TC
Location: 58680 - 59321 (+)
Gene ID: k141_150569_54
Type: pfam
Location: 59325 - 60383 (-)
Type: pfam
Location: 59325 - 60383 (-)
Gene ID: k141_150569_55
Type: TC
Location: 60572 - 61864 (+)
Type: TC
Location: 60572 - 61864 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.