Cluster: CGMR054953_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054953
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_254304 | k141_254304_19 | 20967 | 21599 | + | 2.A.56.3.4 |
| TC | k141_254304 | k141_254304_20 | 21596 | 23518 | + | 2.A.56.3.1 |
| pfam | k141_254304 | k141_254304_21 | 23679 | 24890 | + | DUF2863 |
| CAZyme | k141_254304 | k141_254304_22 | 24970 | 26031 | + | GT104 |
Gene ID: k141_254304_19
Type: TC
Location: 20967 - 21599 (+)
Type: TC
Location: 20967 - 21599 (+)
Gene ID: k141_254304_20
Type: TC
Location: 21596 - 23518 (+)
Type: TC
Location: 21596 - 23518 (+)
Gene ID: k141_254304_21
Type: pfam
Location: 23679 - 24890 (+)
Type: pfam
Location: 23679 - 24890 (+)
Gene ID: k141_254304_22
Type: CAZyme
Location: 24970 - 26031 (+)
Type: CAZyme
Location: 24970 - 26031 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alcaligenes
Species
Alcaligenes faecalis_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.