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Cluster: CGMR054879_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_247680 k141_247680_13 12751 14928 - GH73
pfam k141_247680 k141_247680_14 15125 16381 - MMR_HSR1 | FeoB_N | GTP-bdg_N | GTP-bdg_M
pfam k141_247680 k141_247680_15 16391 17278 - TPR_6
TC k141_247680 k141_247680_16 17405 18796 - 2.A.66.1.32
pfam k141_247680 k141_247680_17 18936 19457 - CarD_TRCF_RID | CarD_C
CAZyme k141_247680 k141_247680_18 19826 20842 + CBM63
pfam k141_247680 k141_247680_19 20795 21616 - DUF4130
NULL(UNKNOWN) k141_247680 k141_247680_20 21588 22952 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_247680 k141_247680_21 23181 24002 - 1.B.52.2.1
Gene ID: k141_247680_13
Type: CAZyme
Location: 12751 - 14928 (-)
Gene ID: k141_247680_14
Type: pfam
Location: 15125 - 16381 (-)
Gene ID: k141_247680_15
Type: pfam
Location: 16391 - 17278 (-)
Gene ID: k141_247680_16
Type: TC
Location: 17405 - 18796 (-)
Gene ID: k141_247680_17
Type: pfam
Location: 18936 - 19457 (-)
Gene ID: k141_247680_18
Type: CAZyme
Location: 19826 - 20842 (+)
Gene ID: k141_247680_19
Type: pfam
Location: 20795 - 21616 (-)
Gene ID: k141_247680_20
Type:
Location: 21588 - 22952 (-)
Gene ID: k141_247680_21
Type: TC
Location: 23181 - 24002 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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