Cluster: CGMR054879_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054879
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1051542 | k141_1051542_5 | 5639 | 6541 | - | 3.A.1.1.20 |
| TC | k141_1051542 | k141_1051542_6 | 6538 | 7452 | - | 3.A.1.1.23 |
| pfam | k141_1051542 | k141_1051542_7 | 7477 | 9981 | - | SBP_bac_1 |
| CAZyme | k141_1051542 | k141_1051542_8 | 10207 | 11562 | - | GH1 |
| pfam | k141_1051542 | k141_1051542_9 | 11732 | 13702 | + | DUF885 |
| pfam | k141_1051542 | k141_1051542_10 | 13762 | 15090 | - | Big_2 | Big_2 | DUF6273 |
| TC | k141_1051542 | k141_1051542_11 | 15261 | 16364 | + | 2.A.45.2.6 |
Gene ID: k141_1051542_5
Type: TC
Location: 5639 - 6541 (-)
Type: TC
Location: 5639 - 6541 (-)
Gene ID: k141_1051542_6
Type: TC
Location: 6538 - 7452 (-)
Type: TC
Location: 6538 - 7452 (-)
Gene ID: k141_1051542_7
Type: pfam
Location: 7477 - 9981 (-)
Type: pfam
Location: 7477 - 9981 (-)
Gene ID: k141_1051542_8
Type: CAZyme
Location: 10207 - 11562 (-)
Type: CAZyme
Location: 10207 - 11562 (-)
Gene ID: k141_1051542_9
Type: pfam
Location: 11732 - 13702 (+)
Type: pfam
Location: 11732 - 13702 (+)
Gene ID: k141_1051542_10
Type: pfam
Location: 13762 - 15090 (-)
Type: pfam
Location: 13762 - 15090 (-)
Gene ID: k141_1051542_11
Type: TC
Location: 15261 - 16364 (+)
Type: TC
Location: 15261 - 16364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-590
Species
CAG-590 sp947629565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.