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Cluster: CGMR054879_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_33765 k141_33765_16 17867 20173 + CBM4 | GH9
pfam k141_33765 k141_33765_17 20185 20940 + Exo_endo_phos
pfam k141_33765 k141_33765_18 21015 21920 + AP_endonuc_2
TC k141_33765 k141_33765_19 22032 22739 + 3.A.1.122.2
pfam k141_33765 k141_33765_20 22732 24204 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_33765 k141_33765_21 24214 25449 + 3.A.1.122.2
pfam k141_33765 k141_33765_22 25469 26569 - Ala_racemase_C | Ala_racemase_N
TF k141_33765 k141_33765_23 26696 27436 - LytTR
TC k141_33765 k141_33765_24 27455 28810 - 9.B.14.1.13
Gene ID: k141_33765_16
Type: CAZyme
Location: 17867 - 20173 (+)
Gene ID: k141_33765_17
Type: pfam
Location: 20185 - 20940 (+)
Gene ID: k141_33765_18
Type: pfam
Location: 21015 - 21920 (+)
Gene ID: k141_33765_19
Type: TC
Location: 22032 - 22739 (+)
Gene ID: k141_33765_20
Type: pfam
Location: 22732 - 24204 (+)
Gene ID: k141_33765_21
Type: TC
Location: 24214 - 25449 (+)
Gene ID: k141_33765_22
Type: pfam
Location: 25469 - 26569 (-)
Gene ID: k141_33765_23
Type: TF
Location: 26696 - 27436 (-)
Gene ID: k141_33765_24
Type: TC
Location: 27455 - 28810 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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