Cluster: CGMR054879_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054879
- CGC Family ID: CGCFAM_00814
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1219355 | k141_1219355_2 | 381 | 1340 | + | 8.A.5.1.4 |
| pfam | k141_1219355 | k141_1219355_3 | 1426 | 2187 | + | adh_short | adh_short_C2 |
| TC | k141_1219355 | k141_1219355_4 | 2199 | 2858 | + | 9.B.18.1.3 |
| pfam | k141_1219355 | k141_1219355_5 | 2883 | 3884 | + | Transketolase_N | E1_dh | DXP_synthase_N |
| pfam | k141_1219355 | k141_1219355_6 | 4489 | 5409 | + | Transket_pyr | Transketolase_C |
| CAZyme | k141_1219355 | k141_1219355_7 | 5406 | 7118 | + | GT4 | GT4 |
Gene ID: k141_1219355_2
Type: TC
Location: 381 - 1340 (+)
Type: TC
Location: 381 - 1340 (+)
Gene ID: k141_1219355_3
Type: pfam
Location: 1426 - 2187 (+)
Type: pfam
Location: 1426 - 2187 (+)
Gene ID: k141_1219355_4
Type: TC
Location: 2199 - 2858 (+)
Type: TC
Location: 2199 - 2858 (+)
Gene ID: k141_1219355_5
Type: pfam
Location: 2883 - 3884 (+)
Type: pfam
Location: 2883 - 3884 (+)
Gene ID: k141_1219355_6
Type: pfam
Location: 4489 - 5409 (+)
Type: pfam
Location: 4489 - 5409 (+)
Gene ID: k141_1219355_7
Type: CAZyme
Location: 5406 - 7118 (+)
Type: CAZyme
Location: 5406 - 7118 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-590
Species
CAG-590 sp947629565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.