Cluster: CGMR054879_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054879
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_269333 | k141_269333_60 | 73294 | 73971 | - | 3.A.1.105.7 |
| TF | k141_269333 | k141_269333_61 | 73973 | 74347 | - | GntR |
| NULL(UNKNOWN) | k141_269333 | k141_269333_62 | 74344 | 75042 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_269333 | k141_269333_63 | 75044 | 75889 | - | 3.A.1.149.1 |
| STP | k141_269333 | k141_269333_64 | 75998 | 77902 | - | EAL | GGDEF |
| CAZyme | k141_269333 | k141_269333_65 | 77958 | 78884 | - | GH25 |
| TF | k141_269333 | k141_269333_66 | 79124 | 79330 | + | CSD |
| TC | k141_269333 | k141_269333_67 | 79382 | 80041 | - | 3.A.1.122.14 |
Gene ID: k141_269333_60
Type: TC
Location: 73294 - 73971 (-)
Type: TC
Location: 73294 - 73971 (-)
Gene ID: k141_269333_61
Type: TF
Location: 73973 - 74347 (-)
Type: TF
Location: 73973 - 74347 (-)
Gene ID: k141_269333_62
Type:
Location: 74344 - 75042 (-)
Type:
Location: 74344 - 75042 (-)
Gene ID: k141_269333_63
Type: TC
Location: 75044 - 75889 (-)
Type: TC
Location: 75044 - 75889 (-)
Gene ID: k141_269333_64
Type: STP
Location: 75998 - 77902 (-)
Type: STP
Location: 75998 - 77902 (-)
Gene ID: k141_269333_65
Type: CAZyme
Location: 77958 - 78884 (-)
Type: CAZyme
Location: 77958 - 78884 (-)
Gene ID: k141_269333_66
Type: TF
Location: 79124 - 79330 (+)
Type: TF
Location: 79124 - 79330 (+)
Gene ID: k141_269333_67
Type: TC
Location: 79382 - 80041 (-)
Type: TC
Location: 79382 - 80041 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-590
Species
CAG-590 sp947629565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.