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Cluster: CGMR054879_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_269333 k141_269333_43 52386 53279 - 3.A.1.1.25
TF k141_269333 k141_269333_44 53475 54164 + Trans_reg_C
STP k141_269333 k141_269333_45 54161 55432 + HATPase_c | HisKA
TC k141_269333 k141_269333_46 55748 57592 + 4.A.1.2.11
CAZyme k141_269333 k141_269333_47 57595 59058 + GH1
TC k141_269333 k141_269333_48 59143 60852 - 1.B.52.2.1
pfam k141_269333 k141_269333_49 61175 63196 - fn3 | LRR_5 | LRR_5 | LRR_5 | LRR_5
TC k141_269333 k141_269333_50 63713 65335 - 8.A.7.1.1
Gene ID: k141_269333_43
Type: TC
Location: 52386 - 53279 (-)
Gene ID: k141_269333_44
Type: TF
Location: 53475 - 54164 (+)
Gene ID: k141_269333_45
Type: STP
Location: 54161 - 55432 (+)
Gene ID: k141_269333_46
Type: TC
Location: 55748 - 57592 (+)
Gene ID: k141_269333_47
Type: CAZyme
Location: 57595 - 59058 (+)
Gene ID: k141_269333_48
Type: TC
Location: 59143 - 60852 (-)
Gene ID: k141_269333_49
Type: pfam
Location: 61175 - 63196 (-)
Gene ID: k141_269333_50
Type: TC
Location: 63713 - 65335 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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