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Cluster: CGMR054477_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_7026 k141_7026_30 27310 29568 - GH65
TF k141_7026 k141_7026_31 29679 30698 - LacI
pfam k141_7026 k141_7026_32 30824 31264 + ASCH
TC k141_7026 k141_7026_33 31321 33174 - 3.A.3.6.10
TC k141_7026 k141_7026_34 33374 34717 + 2.A.26.1.9
TC k141_7026 k141_7026_35 34784 36310 - 3.A.1.12.8
TC k141_7026 k141_7026_36 36310 37242 - 3.A.1.12.8
TC k141_7026 k141_7026_37 37424 39205 - 3.A.1.135.8
TC k141_7026 k141_7026_38 39206 40939 - 3.A.1.135.8
Gene ID: k141_7026_30
Type: CAZyme
Location: 27310 - 29568 (-)
Gene ID: k141_7026_31
Type: TF
Location: 29679 - 30698 (-)
Gene ID: k141_7026_32
Type: pfam
Location: 30824 - 31264 (+)
Gene ID: k141_7026_33
Type: TC
Location: 31321 - 33174 (-)
Gene ID: k141_7026_34
Type: TC
Location: 33374 - 34717 (+)
Gene ID: k141_7026_35
Type: TC
Location: 34784 - 36310 (-)
Gene ID: k141_7026_36
Type: TC
Location: 36310 - 37242 (-)
Gene ID: k141_7026_37
Type: TC
Location: 37424 - 39205 (-)
Gene ID: k141_7026_38
Type: TC
Location: 39206 - 40939 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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