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Cluster: CGMR054477_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_96808 k141_96808_20 19222 21171 + CBM48 | GH13_9
pfam k141_96808 k141_96808_21 21211 22353 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
pfam k141_96808 k141_96808_22 22358 23494 + NTP_transferase | Hexapep_GlmU
CAZyme k141_96808 k141_96808_23 23494 24927 + GT5
CAZyme k141_96808 k141_96808_24 24973 27405 + GT35
CAZyme k141_96808 k141_96808_25 27389 29209 + GH13_39
STP k141_96808 k141_96808_26 29402 30295 + SBP_bac_1
TC k141_96808 k141_96808_27 30282 31199 + 3.A.1.7.5
TC k141_96808 k141_96808_28 31203 32090 + 3.A.1.7.5
TC k141_96808 k141_96808_29 32106 32915 + 3.A.1.7.2
TC k141_96808 k141_96808_30 32929 33690 + 3.A.1.7.5
Gene ID: k141_96808_20
Type: CAZyme
Location: 19222 - 21171 (+)
Gene ID: k141_96808_21
Type: pfam
Location: 21211 - 22353 (+)
Gene ID: k141_96808_22
Type: pfam
Location: 22358 - 23494 (+)
Gene ID: k141_96808_23
Type: CAZyme
Location: 23494 - 24927 (+)
Gene ID: k141_96808_24
Type: CAZyme
Location: 24973 - 27405 (+)
Gene ID: k141_96808_25
Type: CAZyme
Location: 27389 - 29209 (+)
Gene ID: k141_96808_26
Type: STP
Location: 29402 - 30295 (+)
Gene ID: k141_96808_27
Type: TC
Location: 30282 - 31199 (+)
Gene ID: k141_96808_28
Type: TC
Location: 31203 - 32090 (+)
Gene ID: k141_96808_29
Type: TC
Location: 32106 - 32915 (+)
Gene ID: k141_96808_30
Type: TC
Location: 32929 - 33690 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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