Cluster: CGMR054477_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: CGMR054477
- CGC Family ID: CGCFAM_00066
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_55127 | k141_55127_17 | 15214 | 15870 | + | 9.B.105.2.2 |
| TC | k141_55127 | k141_55127_18 | 16115 | 17752 | - | 2.A.3.11.1 |
| CAZyme | k141_55127 | k141_55127_19 | 17982 | 19373 | - | GH1 |
| pfam | k141_55127 | k141_55127_20 | 19379 | 19840 | - | ROK |
| pfam | k141_55127 | k141_55127_21 | 19827 | 20252 | - | ROK |
| TC | k141_55127 | k141_55127_22 | 20326 | 20649 | - | 4.A.3.2.4 |
| TC | k141_55127 | k141_55127_23 | 20663 | 20980 | - | 4.A.3.2.4 |
| TC | k141_55127 | k141_55127_24 | 21006 | 22439 | - | 4.A.3.2.8 |
Gene ID: k141_55127_17
Type: TC
Location: 15214 - 15870 (+)
Type: TC
Location: 15214 - 15870 (+)
Gene ID: k141_55127_18
Type: TC
Location: 16115 - 17752 (-)
Type: TC
Location: 16115 - 17752 (-)
Gene ID: k141_55127_19
Type: CAZyme
Location: 17982 - 19373 (-)
Type: CAZyme
Location: 17982 - 19373 (-)
Gene ID: k141_55127_20
Type: pfam
Location: 19379 - 19840 (-)
Type: pfam
Location: 19379 - 19840 (-)
Gene ID: k141_55127_21
Type: pfam
Location: 19827 - 20252 (-)
Type: pfam
Location: 19827 - 20252 (-)
Gene ID: k141_55127_22
Type: TC
Location: 20326 - 20649 (-)
Type: TC
Location: 20326 - 20649 (-)
Gene ID: k141_55127_23
Type: TC
Location: 20663 - 20980 (-)
Type: TC
Location: 20663 - 20980 (-)
Gene ID: k141_55127_24
Type: TC
Location: 21006 - 22439 (-)
Type: TC
Location: 21006 - 22439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.