Cluster: CGMR054477_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054477
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4130 | k141_4130_48 | 47399 | 47866 | - | 4.A.1.1.11 |
| TC | k141_4130 | k141_4130_49 | 47869 | 48684 | - | 4.A.1.1.13 |
| TC | k141_4130 | k141_4130_50 | 48626 | 49369 | - | 4.A.1.1.14 |
| pfam | k141_4130 | k141_4130_51 | 49375 | 50067 | - | NanE |
| TF | k141_4130 | k141_4130_52 | 50224 | 51036 | + | HTH_6 |
| CAZyme | k141_4130 | k141_4130_53 | 51194 | 52066 | - | CE1 |
Gene ID: k141_4130_48
Type: TC
Location: 47399 - 47866 (-)
Type: TC
Location: 47399 - 47866 (-)
Gene ID: k141_4130_49
Type: TC
Location: 47869 - 48684 (-)
Type: TC
Location: 47869 - 48684 (-)
Gene ID: k141_4130_50
Type: TC
Location: 48626 - 49369 (-)
Type: TC
Location: 48626 - 49369 (-)
Gene ID: k141_4130_51
Type: pfam
Location: 49375 - 50067 (-)
Type: pfam
Location: 49375 - 50067 (-)
Gene ID: k141_4130_52
Type: TF
Location: 50224 - 51036 (+)
Type: TF
Location: 50224 - 51036 (+)
Gene ID: k141_4130_53
Type: CAZyme
Location: 51194 - 52066 (-)
Type: CAZyme
Location: 51194 - 52066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.