Cluster: CGMR054477_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: CGMR054477
- CGC Family ID: CGCFAM_00243
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_66130 | k141_66130_31 | 32111 | 33715 | + | GH35 |
| TC | k141_66130 | k141_66130_32 | 33712 | 34083 | + | 4.A.6.1.18 |
| TC | k141_66130 | k141_66130_33 | 34201 | 35094 | + | 4.A.6.1.18 |
| TC | k141_66130 | k141_66130_34 | 35081 | 35905 | + | 4.A.6.1.18 |
| TC | k141_66130 | k141_66130_35 | 35974 | 36372 | + | 4.A.6.1.18 |
| STP | k141_66130 | k141_66130_36 | 36385 | 37551 | + | SIS | SIS |
| CAZyme | k141_66130 | k141_66130_37 | 37567 | 38715 | + | CE9 |
Gene ID: k141_66130_31
Type: CAZyme
Location: 32111 - 33715 (+)
Type: CAZyme
Location: 32111 - 33715 (+)
Gene ID: k141_66130_32
Type: TC
Location: 33712 - 34083 (+)
Type: TC
Location: 33712 - 34083 (+)
Gene ID: k141_66130_33
Type: TC
Location: 34201 - 35094 (+)
Type: TC
Location: 34201 - 35094 (+)
Gene ID: k141_66130_34
Type: TC
Location: 35081 - 35905 (+)
Type: TC
Location: 35081 - 35905 (+)
Gene ID: k141_66130_35
Type: TC
Location: 35974 - 36372 (+)
Type: TC
Location: 35974 - 36372 (+)
Gene ID: k141_66130_36
Type: STP
Location: 36385 - 37551 (+)
Type: STP
Location: 36385 - 37551 (+)
Gene ID: k141_66130_37
Type: CAZyme
Location: 37567 - 38715 (+)
Type: CAZyme
Location: 37567 - 38715 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.