Cluster: CGMR054477_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054477
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_7026 | k141_7026_90 | 84112 | 85596 | - | GH1 |
| pfam | k141_7026 | k141_7026_91 | 85616 | 86176 | - | His_Phos_1 |
| pfam | k141_7026 | k141_7026_92 | 86486 | 88276 | - | DUF2207 | DUF2207_C |
| TC | k141_7026 | k141_7026_93 | 88476 | 89156 | + | 2.A.89.3.2 |
| TC | k141_7026 | k141_7026_94 | 89163 | 89837 | + | 2.A.89.3.2 |
| NULL(UNKNOWN) | k141_7026 | k141_7026_95 | 90272 | 90508 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_7026 | k141_7026_96 | 90582 | 91361 | - | LytTR |
| TC | k141_7026 | k141_7026_97 | 91367 | 92122 | - | 9.B.14.1.13 |
| NULL(UNKNOWN) | k141_7026 | k141_7026_98 | 92132 | 92629 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_7026 | k141_7026_99 | 92841 | 93227 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_7026 | k141_7026_100 | 93837 | 94898 | - | 3.A.1.147.8 |
| NULL(UNKNOWN) | k141_7026 | k141_7026_101 | 94989 | 95159 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_7026 | k141_7026_102 | 95161 | 95889 | - | 3.A.1.147.8 |
Gene ID: k141_7026_90
Type: CAZyme
Location: 84112 - 85596 (-)
Type: CAZyme
Location: 84112 - 85596 (-)
Gene ID: k141_7026_91
Type: pfam
Location: 85616 - 86176 (-)
Type: pfam
Location: 85616 - 86176 (-)
Gene ID: k141_7026_92
Type: pfam
Location: 86486 - 88276 (-)
Type: pfam
Location: 86486 - 88276 (-)
Gene ID: k141_7026_93
Type: TC
Location: 88476 - 89156 (+)
Type: TC
Location: 88476 - 89156 (+)
Gene ID: k141_7026_94
Type: TC
Location: 89163 - 89837 (+)
Type: TC
Location: 89163 - 89837 (+)
Gene ID: k141_7026_95
Type:
Location: 90272 - 90508 (-)
Type:
Location: 90272 - 90508 (-)
Gene ID: k141_7026_96
Type: TF
Location: 90582 - 91361 (-)
Type: TF
Location: 90582 - 91361 (-)
Gene ID: k141_7026_97
Type: TC
Location: 91367 - 92122 (-)
Type: TC
Location: 91367 - 92122 (-)
Gene ID: k141_7026_98
Type:
Location: 92132 - 92629 (-)
Type:
Location: 92132 - 92629 (-)
Gene ID: k141_7026_99
Type:
Location: 92841 - 93227 (+)
Type:
Location: 92841 - 93227 (+)
Gene ID: k141_7026_100
Type: TC
Location: 93837 - 94898 (-)
Type: TC
Location: 93837 - 94898 (-)
Gene ID: k141_7026_101
Type:
Location: 94989 - 95159 (-)
Type:
Location: 94989 - 95159 (-)
Gene ID: k141_7026_102
Type: TC
Location: 95161 - 95889 (-)
Type: TC
Location: 95161 - 95889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus animalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.