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Cluster: CGMR054002_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3182 k141_3182_1 795 2405 + 3.A.1.5.27
TC k141_3182 k141_3182_2 2651 3670 + 3.A.1.5.39
TC k141_3182 k141_3182_3 3680 4582 + 3.A.1.5.39
TC k141_3182 k141_3182_4 4595 5581 + 3.A.1.5.27
TC k141_3182 k141_3182_5 5571 6581 + 3.A.1.5.27
pfam k141_3182 k141_3182_6 7056 7688 + CBP_BcsO
STP k141_3182 k141_3182_7 7730 8479 + CbiA
CAZyme k141_3182 k141_3182_8 8541 10646 + GT2
TC k141_3182 k141_3182_9 10643 13144 + 4.D.3.1.6
TC k141_3182 k141_3182_10 13156 16959 + 1.B.55.3.1
pfam k141_3182 k141_3182_11 16959 17405 + Cellsynth_D
CAZyme k141_3182 k141_3182_12 17415 18419 + GH8
NULL(UNKNOWN) k141_3182 k141_3182_13 18449 18610 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_3182 k141_3182_14 18539 21919 - 1.B.55.3.1
TC k141_3182 k141_3182_15 21912 24215 - 4.D.3.1.6
CAZyme k141_3182 k141_3182_16 24225 26840 - GT2
Gene ID: k141_3182_1
Type: TC
Location: 795 - 2405 (+)
Gene ID: k141_3182_2
Type: TC
Location: 2651 - 3670 (+)
Gene ID: k141_3182_3
Type: TC
Location: 3680 - 4582 (+)
Gene ID: k141_3182_4
Type: TC
Location: 4595 - 5581 (+)
Gene ID: k141_3182_5
Type: TC
Location: 5571 - 6581 (+)
Gene ID: k141_3182_6
Type: pfam
Location: 7056 - 7688 (+)
Gene ID: k141_3182_7
Type: STP
Location: 7730 - 8479 (+)
Gene ID: k141_3182_8
Type: CAZyme
Location: 8541 - 10646 (+)
Gene ID: k141_3182_9
Type: TC
Location: 10643 - 13144 (+)
Gene ID: k141_3182_10
Type: TC
Location: 13156 - 16959 (+)
Gene ID: k141_3182_11
Type: pfam
Location: 16959 - 17405 (+)
Gene ID: k141_3182_12
Type: CAZyme
Location: 17415 - 18419 (+)
Gene ID: k141_3182_13
Type:
Location: 18449 - 18610 (+)
Gene ID: k141_3182_14
Type: TC
Location: 18539 - 21919 (-)
Gene ID: k141_3182_15
Type: TC
Location: 21912 - 24215 (-)
Gene ID: k141_3182_16
Type: CAZyme
Location: 24225 - 26840 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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