Cluster: CGMR054002_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054002
- CGC Family ID: CGCFAM_02218
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6155 | k141_6155_2 | 215 | 1486 | - | 3.A.1.4.5 |
| TF | k141_6155 | k141_6155_3 | 1514 | 2215 | - | GntR |
| sulfatase | k141_6155 | k141_6155_4 | 2225 | 5842 | - | S1_37 |
| TC | k141_6155 | k141_6155_5 | 5845 | 7641 | - | 3.A.9.1.1 |
| CAZyme | k141_6155 | k141_6155_6 | 7898 | 9817 | + | GH23 |
Gene ID: k141_6155_2
Type: TC
Location: 215 - 1486 (-)
Type: TC
Location: 215 - 1486 (-)
Gene ID: k141_6155_3
Type: TF
Location: 1514 - 2215 (-)
Type: TF
Location: 1514 - 2215 (-)
Gene ID: k141_6155_4
Type: sulfatase
Location: 2225 - 5842 (-)
Type: sulfatase
Location: 2225 - 5842 (-)
Gene ID: k141_6155_5
Type: TC
Location: 5845 - 7641 (-)
Type: TC
Location: 5845 - 7641 (-)
Gene ID: k141_6155_6
Type: CAZyme
Location: 7898 - 9817 (+)
Type: CAZyme
Location: 7898 - 9817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea dispersa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.