Cluster: CGMR054002_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054002
- CGC Family ID: CGCFAM_00399
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_22437 | k141_22437_16 | 18090 | 18551 | - | 8.A.2.1.3 |
| CAZyme | k141_22437 | k141_22437_17 | 18615 | 20228 | + | AA1 |
| STP | k141_22437 | k141_22437_18 | 20215 | 21510 | - | Aminotran_1_2 |
| STP | k141_22437 | k141_22437_19 | 21665 | 22201 | + | Pribosyltran |
| TC | k141_22437 | k141_22437_20 | 22447 | 23373 | + | 3.A.1.105.17 |
| TC | k141_22437 | k141_22437_21 | 23370 | 24140 | + | 3.A.1.105.17 |
Gene ID: k141_22437_16
Type: TC
Location: 18090 - 18551 (-)
Type: TC
Location: 18090 - 18551 (-)
Gene ID: k141_22437_17
Type: CAZyme
Location: 18615 - 20228 (+)
Type: CAZyme
Location: 18615 - 20228 (+)
Gene ID: k141_22437_18
Type: STP
Location: 20215 - 21510 (-)
Type: STP
Location: 20215 - 21510 (-)
Gene ID: k141_22437_19
Type: STP
Location: 21665 - 22201 (+)
Type: STP
Location: 21665 - 22201 (+)
Gene ID: k141_22437_20
Type: TC
Location: 22447 - 23373 (+)
Type: TC
Location: 22447 - 23373 (+)
Gene ID: k141_22437_21
Type: TC
Location: 23370 - 24140 (+)
Type: TC
Location: 23370 - 24140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea dispersa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.