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Cluster: CGMR054002_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_14415 k141_14415_1 3 1604 - CBM48 | GH13_11
CAZyme k141_14415 k141_14415_2 1664 4159 - GH13_26
CAZyme k141_14415 k141_14415_3 4156 5940 - GH13_10
pfam k141_14415 k141_14415_4 6269 6478 + CsbD
TC k141_14415 k141_14415_5 6704 7984 - 2.A.1.6.4
TC k141_14415 k141_14415_6 8124 9542 - 2.A.1.6.4
pfam k141_14415 k141_14415_7 10042 10581 - SnoaL_4
TF k141_14415 k141_14415_8 10702 11595 + HTH_1
TC k141_14415 k141_14415_9 11826 13145 + 2.A.1.14.3
Gene ID: k141_14415_1
Type: CAZyme
Location: 3 - 1604 (-)
Gene ID: k141_14415_2
Type: CAZyme
Location: 1664 - 4159 (-)
Gene ID: k141_14415_3
Type: CAZyme
Location: 4156 - 5940 (-)
Gene ID: k141_14415_4
Type: pfam
Location: 6269 - 6478 (+)
Gene ID: k141_14415_5
Type: TC
Location: 6704 - 7984 (-)
Gene ID: k141_14415_6
Type: TC
Location: 8124 - 9542 (-)
Gene ID: k141_14415_7
Type: pfam
Location: 10042 - 10581 (-)
Gene ID: k141_14415_8
Type: TF
Location: 10702 - 11595 (+)
Gene ID: k141_14415_9
Type: TC
Location: 11826 - 13145 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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