Cluster: CGMR054002_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR054002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30222 | k141_30222_20 | 16402 | 16782 | + | 3.A.6.2.1 |
| TC | k141_30222 | k141_30222_21 | 16782 | 17135 | + | 3.A.6.2.1 |
| TC | k141_30222 | k141_30222_22 | 17132 | 17866 | + | 3.A.6.2.1 |
| TC | k141_30222 | k141_30222_23 | 17874 | 18143 | + | 3.A.6.2.1 |
| TC | k141_30222 | k141_30222_24 | 18146 | 18922 | + | 3.A.6.2.1 |
| NULL(UNKNOWN) | k141_30222 | k141_30222_25 | 19132 | 19404 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_30222 | k141_30222_26 | 19804 | 20637 | - | GH31_2 |
Gene ID: k141_30222_20
Type: TC
Location: 16402 - 16782 (+)
Type: TC
Location: 16402 - 16782 (+)
Gene ID: k141_30222_21
Type: TC
Location: 16782 - 17135 (+)
Type: TC
Location: 16782 - 17135 (+)
Gene ID: k141_30222_22
Type: TC
Location: 17132 - 17866 (+)
Type: TC
Location: 17132 - 17866 (+)
Gene ID: k141_30222_23
Type: TC
Location: 17874 - 18143 (+)
Type: TC
Location: 17874 - 18143 (+)
Gene ID: k141_30222_24
Type: TC
Location: 18146 - 18922 (+)
Type: TC
Location: 18146 - 18922 (+)
Gene ID: k141_30222_25
Type:
Location: 19132 - 19404 (-)
Type:
Location: 19132 - 19404 (-)
Gene ID: k141_30222_26
Type: CAZyme
Location: 19804 - 20637 (-)
Type: CAZyme
Location: 19804 - 20637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea dispersa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.