Cluster: CGMR054002_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR054002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_30234 | k141_30234_2 | 86 | 1750 | + | GH13_29 |
| NULL(UNKNOWN) | k141_30234 | k141_30234_3 | 1803 | 2588 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_30234 | k141_30234_4 | 2637 | 4043 | - | Radical_SAM |
| CAZyme | k141_30234 | k141_30234_5 | 4043 | 5317 | - | GT2 |
| CAZyme | k141_30234 | k141_30234_6 | 5331 | 6704 | - | GT4 |
| TC | k141_30234 | k141_30234_7 | 7105 | 8457 | - | 2.A.1.14.33 |
Gene ID: k141_30234_2
Type: CAZyme
Location: 86 - 1750 (+)
Type: CAZyme
Location: 86 - 1750 (+)
Gene ID: k141_30234_3
Type:
Location: 1803 - 2588 (-)
Type:
Location: 1803 - 2588 (-)
Gene ID: k141_30234_4
Type: pfam
Location: 2637 - 4043 (-)
Type: pfam
Location: 2637 - 4043 (-)
Gene ID: k141_30234_5
Type: CAZyme
Location: 4043 - 5317 (-)
Type: CAZyme
Location: 4043 - 5317 (-)
Gene ID: k141_30234_6
Type: CAZyme
Location: 5331 - 6704 (-)
Type: CAZyme
Location: 5331 - 6704 (-)
Gene ID: k141_30234_7
Type: TC
Location: 7105 - 8457 (-)
Type: TC
Location: 7105 - 8457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea dispersa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.