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Cluster: CGMR054002_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_24280 k141_24280_17 18971 20326 - 4.A.3.2.2
CAZyme k141_24280 k141_24280_18 20480 21787 - GH4
TC k141_24280 k141_24280_19 21780 22124 - 4.A.3.2.9
TC k141_24280 k141_24280_20 22184 22489 - 4.A.3.2.9
TF k141_24280 k141_24280_21 22781 23725 + HTH_6 | HTH_6
pfam k141_24280 k141_24280_22 23742 24830 - Iso_dh
TC k141_24280 k141_24280_23 24847 26157 - 2.A.1.14.3
TF k141_24280 k141_24280_24 26288 27196 + HTH_1
TF k141_24280 k141_24280_25 27315 27860 + DUF24
TC k141_24280 k141_24280_26 27857 28897 + 8.A.1.1.2
TC k141_24280 k141_24280_27 28894 30450 + 2.A.1.3.18
Gene ID: k141_24280_17
Type: TC
Location: 18971 - 20326 (-)
Gene ID: k141_24280_18
Type: CAZyme
Location: 20480 - 21787 (-)
Gene ID: k141_24280_19
Type: TC
Location: 21780 - 22124 (-)
Gene ID: k141_24280_20
Type: TC
Location: 22184 - 22489 (-)
Gene ID: k141_24280_21
Type: TF
Location: 22781 - 23725 (+)
Gene ID: k141_24280_22
Type: pfam
Location: 23742 - 24830 (-)
Gene ID: k141_24280_23
Type: TC
Location: 24847 - 26157 (-)
Gene ID: k141_24280_24
Type: TF
Location: 26288 - 27196 (+)
Gene ID: k141_24280_25
Type: TF
Location: 27315 - 27860 (+)
Gene ID: k141_24280_26
Type: TC
Location: 27857 - 28897 (+)
Gene ID: k141_24280_27
Type: TC
Location: 28894 - 30450 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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