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Cluster: CGMR053952_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_167087 k141_167087_122 120645 121985 - 3.A.5.1.1
STP k141_167087 k141_167087_123 122001 122306 - Sigma70_r4
TC k141_167087 k141_167087_124 122449 123930 + 3.A.1.5.22
pfam k141_167087 k141_167087_125 123935 124315 + SdpI
TC k141_167087 k141_167087_126 124335 125504 - 2.A.49.9.4
CAZyme k141_167087 k141_167087_127 125588 127180 - GH36
pfam k141_167087 k141_167087_128 127249 127938 + FMN_red
CAZyme k141_167087 k141_167087_129 128019 129929 - GH127
Gene ID: k141_167087_122
Type: TC
Location: 120645 - 121985 (-)
Gene ID: k141_167087_123
Type: STP
Location: 122001 - 122306 (-)
Gene ID: k141_167087_124
Type: TC
Location: 122449 - 123930 (+)
Gene ID: k141_167087_125
Type: pfam
Location: 123935 - 124315 (+)
Gene ID: k141_167087_126
Type: TC
Location: 124335 - 125504 (-)
Gene ID: k141_167087_127
Type: CAZyme
Location: 125588 - 127180 (-)
Gene ID: k141_167087_128
Type: pfam
Location: 127249 - 127938 (+)
Gene ID: k141_167087_129
Type: CAZyme
Location: 128019 - 129929 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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