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Cluster: CGMR053952_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_167087 k141_167087_86 87033 87962 + 3.A.1.34.1
TC k141_167087 k141_167087_87 87955 88749 + 3.A.1.34.1
TF k141_167087 k141_167087_88 88755 89558 + HTH_AraC | HTH_AraC
CAZyme k141_167087 k141_167087_89 89645 90634 + GH130_2
TF k141_167087 k141_167087_90 90675 91517 - HTH_AraC
CAZyme k141_167087 k141_167087_91 91635 94664 + GH38
NULL(UNKNOWN) k141_167087 k141_167087_92 94768 94998 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_167087 k141_167087_93 95029 96204 + malic | AlaDh_PNT_C | Malic_M
CAZyme k141_167087 k141_167087_94 96256 97725 - GH77
Gene ID: k141_167087_86
Type: TC
Location: 87033 - 87962 (+)
Gene ID: k141_167087_87
Type: TC
Location: 87955 - 88749 (+)
Gene ID: k141_167087_88
Type: TF
Location: 88755 - 89558 (+)
Gene ID: k141_167087_89
Type: CAZyme
Location: 89645 - 90634 (+)
Gene ID: k141_167087_90
Type: TF
Location: 90675 - 91517 (-)
Gene ID: k141_167087_91
Type: CAZyme
Location: 91635 - 94664 (+)
Gene ID: k141_167087_92
Type:
Location: 94768 - 94998 (+)
Gene ID: k141_167087_93
Type: pfam
Location: 95029 - 96204 (+)
Gene ID: k141_167087_94
Type: CAZyme
Location: 96256 - 97725 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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