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Cluster: CGMR053952_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17134 k141_17134_18 20542 21312 - 3.D.6.1.3
TC k141_17134 k141_17134_19 21317 21901 - 3.D.6.1.2
TC k141_17134 k141_17134_20 21894 22607 - 3.D.6.1.2
TC k141_17134 k141_17134_21 22614 23207 - 3.D.6.1.2
TC k141_17134 k141_17134_22 23204 24160 - 3.D.6.1.2
TC k141_17134 k141_17134_23 24157 25491 - 3.D.6.1.2
TF k141_17134 k141_17134_24 25638 26051 + FUR
TC k141_17134 k141_17134_25 26048 26944 + 3.A.1.15.15
TC k141_17134 k141_17134_26 26941 27621 + 3.A.1.15.8
TC k141_17134 k141_17134_27 27622 28437 + 3.A.1.15.5
pfam k141_17134 k141_17134_28 28495 29712 + IMS | IMS_C
NULL(UNKNOWN) k141_17134 k141_17134_29 29752 31446 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_17134 k141_17134_30 31421 32320 - 3.A.1.132.6
TF k141_17134 k141_17134_31 32317 32697 - GntR
CAZyme k141_17134 k141_17134_32 32844 35324 - GH38
pfam k141_17134 k141_17134_33 35341 35844 - Acetyltransf_9
pfam k141_17134 k141_17134_34 35841 36722 - LPG_synthase_C
CAZyme k141_17134 k141_17134_35 37021 39423 + GT35
CAZyme k141_17134 k141_17134_36 39423 41279 + GH13_39
Gene ID: k141_17134_18
Type: TC
Location: 20542 - 21312 (-)
Gene ID: k141_17134_19
Type: TC
Location: 21317 - 21901 (-)
Gene ID: k141_17134_20
Type: TC
Location: 21894 - 22607 (-)
Gene ID: k141_17134_21
Type: TC
Location: 22614 - 23207 (-)
Gene ID: k141_17134_22
Type: TC
Location: 23204 - 24160 (-)
Gene ID: k141_17134_23
Type: TC
Location: 24157 - 25491 (-)
Gene ID: k141_17134_24
Type: TF
Location: 25638 - 26051 (+)
Gene ID: k141_17134_25
Type: TC
Location: 26048 - 26944 (+)
Gene ID: k141_17134_26
Type: TC
Location: 26941 - 27621 (+)
Gene ID: k141_17134_27
Type: TC
Location: 27622 - 28437 (+)
Gene ID: k141_17134_28
Type: pfam
Location: 28495 - 29712 (+)
Gene ID: k141_17134_29
Type:
Location: 29752 - 31446 (-)
Gene ID: k141_17134_30
Type: TC
Location: 31421 - 32320 (-)
Gene ID: k141_17134_31
Type: TF
Location: 32317 - 32697 (-)
Gene ID: k141_17134_32
Type: CAZyme
Location: 32844 - 35324 (-)
Gene ID: k141_17134_33
Type: pfam
Location: 35341 - 35844 (-)
Gene ID: k141_17134_34
Type: pfam
Location: 35841 - 36722 (-)
Gene ID: k141_17134_35
Type: CAZyme
Location: 37021 - 39423 (+)
Gene ID: k141_17134_36
Type: CAZyme
Location: 39423 - 41279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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