Cluster: CGMR053790_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR053790
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_267453 | k141_267453_19 | 15567 | 16808 | + | 9.B.146.1.3 |
| pfam | k141_267453 | k141_267453_20 | 16812 | 18146 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_267453 | k141_267453_21 | 18162 | 19361 | + | 2.A.103.1.2 |
| CAZyme | k141_267453 | k141_267453_22 | 19333 | 20439 | + | GT28 |
| pfam | k141_267453 | k141_267453_23 | 20439 | 21779 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| NULL(UNKNOWN) | k141_267453 | k141_267453_24 | 21769 | 22512 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_267453 | k141_267453_25 | 22499 | 23950 | + | 9.B.157.1.3 |
Gene ID: k141_267453_19
Type: TC
Location: 15567 - 16808 (+)
Type: TC
Location: 15567 - 16808 (+)
Gene ID: k141_267453_20
Type: pfam
Location: 16812 - 18146 (+)
Type: pfam
Location: 16812 - 18146 (+)
Gene ID: k141_267453_21
Type: TC
Location: 18162 - 19361 (+)
Type: TC
Location: 18162 - 19361 (+)
Gene ID: k141_267453_22
Type: CAZyme
Location: 19333 - 20439 (+)
Type: CAZyme
Location: 19333 - 20439 (+)
Gene ID: k141_267453_23
Type: pfam
Location: 20439 - 21779 (+)
Type: pfam
Location: 20439 - 21779 (+)
Gene ID: k141_267453_24
Type:
Location: 21769 - 22512 (+)
Type:
Location: 21769 - 22512 (+)
Gene ID: k141_267453_25
Type: TC
Location: 22499 - 23950 (+)
Type: TC
Location: 22499 - 23950 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Species
Empedobacter falsenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.